Stage XY - Template

Short statement of the stage’s purpose

config template

Input

Describe type and format of the minimally required data and metadata.

should pass check_input.py

Output

Describe type and format of the stage output data and metadata, eventual intermediate output, and where it is stored.

Usage

Describe the functionality of the stage, what type of blocks are used and how they can be arranged, and eventually special stage parameters. However, an account of the exact blocks and their features should be placed into the Snakefile’s and scripts’ docstring.

Blocks

Utility Blocks (fixed)

check_input

Check whether the input data representation adheres to the stage's requirements.

Other Blocks (choose any)

script_template	Offsets the signal in all channels by a fixed value.
minimal_example	Z-score the signal of each channel.