detrending

stage02_processing.scripts.detrending

Detrend the signal in each channel by order 0 (constant) or 1 (linear).

usage: detrending [-h] --data [DATA] --output [OUTPUT] [--order [ORDER]]
                  --img_dir [IMG_DIR] [--img_name [IMG_NAME]]
                  [--plot_channels PLOT_CHANNELS [PLOT_CHANNELS ...]]

Named Arguments

--data

path to input data in neo format

--output

path of output file

--order

detrending order

Default: 1

--img_dir

path of output figure directory

--img_name

example filename for channel 0

Default: 'processed_trace_channel0.png'

--plot_channels

list of channels to plot